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    Metagenomic Sequencing Market

    ID: MRFR/LS/4149-HCR
    90 Pages
    Kinjoll Dey
    October 2025

    Metagenomic Sequencing Market Research Report Information By Product & Service (Reagents and Consumables, Instruments, and Services) By Technology (Shotgun Metagenomic Sequencing, 16s rRNA Sequencing, Whole Genome Sequencing and De Novo Assembly and Metatranscriptomic) And By Region (North America, Europe, Asia-Pacific, And Rest Of The World) –Market Forecast Till the year 2032

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    Metagenomic Sequencing Market Infographic
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    Metagenomic Sequencing Market Summary

    The Global Metagenomic Sequencing Market is projected to experience substantial growth from 0.68 USD Billion in 2024 to 3.16 USD Billion by 2035.

    Key Market Trends & Highlights

    Metagenomic Sequencing Key Trends and Highlights

    • The market is expected to grow at a compound annual growth rate of 15.0 percent from 2025 to 2035.
    • By 2035, the market valuation is anticipated to reach 3.16 USD Billion, indicating robust expansion.
    • in 2024, the market is valued at 0.68 USD Billion, reflecting the increasing interest in metagenomic applications.
    • Growing adoption of metagenomic sequencing due to advancements in genomic technologies is a major market driver.

    Market Size & Forecast

    2024 Market Size 0.68 (USD Billion)
    2035 Market Size 3.16 (USD Billion)
    CAGR (2025-2035) 15.00%

    Major Players

    Pattern AG, Illumina Inc., Thermo Fisher Scientific Inc., BGI Genomics Co. Ltd., Oxford Nanopore Technologies Ltd, Eurofins Genomics, Pacific Biosciences of California Inc., Macrogen Inc., AstraZeneca, Swift Bioscience Inc.

    Metagenomic Sequencing Market Drivers

    Rising Demand for Personalized Medicine

    The Global Metagenomic Sequencing Market Industry is witnessing a surge in demand for personalized medicine, which is increasingly being recognized for its potential to tailor treatments based on individual genetic profiles. As healthcare providers seek to enhance patient outcomes, metagenomic sequencing offers insights into the microbiome's role in health and disease. This trend is expected to drive the market's growth, with projections indicating a market value of 0.68 USD Billion in 2024. By 2035, this figure could escalate to 3.16 USD Billion, reflecting a compound annual growth rate (CAGR) of 15.0% from 2025 to 2035.

    Market Segment Insights

    Metagenomic Sequencing Product & Service Insights

    The Metagenomic Sequencing market segmentation, based on product & service, includes Reagents and Consumables, Instruments, and Services. The service segment dominates the market, accounting for the largest market revenue due to the higher utilization of metagenomic sequencing services and analysis and interpretation solutions of data. Further, the reagent and consumables segment is the second-largest contributor to the market segment, as the utilization of reagents and consumables has increased due to lower metagenomic sequencing error margins.

    Figure 1 Metagenomic Sequencing Market, by Product & Services, 2023 & 2032 (USD Billion)

    Source The Secondary Research, Primary Research, MRFR Database, and Analyst Review

    Metagenomic Sequencing Technology Insights

    The Metagenomic Sequencing market segmentation, based on technology, includes shotgun metagenomic sequencing, 16s rRNA sequencing, whole genome sequencing and de novo assembly and metatranscriptomic. The 16s rRNA sequencing segment dominates the market as it is commonly utilized to classify, identify, and quantify microbes in complex biological mixtures like gut and environmental samples. Various manufacturers have designed newer techniques combined with 16s rRNA metagenomic sequencing that will assist in combating the conventional issues faced earlier.

    Further, the addition of an Internal Transcribed Spacer in combination with 16s rRNA is anticipated to offer a cost-effective technique for identifying strains that may not be found by using traditional methods.

    Get more detailed insights about Metagenomic Sequencing Market

    Regional Insights

    By region, the study gives market insights into the North America, Europe, Asia-Pacific, and the Rest of the World. North American Metagenomic Sequencing market dominates the market due to the stronghold on deoxyribonucleic acid sequencing technologies because of the continuous improvement and availability and accessibility of DNA sequencing in the North American region. The US is the largest contributor to the growth of the metagenomic sequencing market in the North American region.

    Further, the prime countries studied in the market report are the US, Canada, France, the UK, German, Italy, Spain, Japan, India, China, Australia, South Korea, and Brazil.

    Figure 2 METAGENOMIC SEQUENCING MARKET SHARE BY REGION 2022 (USD Billion)METAGENOMIC SEQUENCING MARKET SHARE BY REGION 2022

    Source The Secondary Research, Primary Research, MRFR Database, and Analyst Review

    The Asia-Pacific Metagenomic Sequencing Market accounts for the second-largest market share due to the increasing emphasis of healthcare professionals on the drug discovery and development in the biotechnology industry. Moreover, China’s Metagenomic Sequencing market held the largest market share, and the Indian Metagenomic Sequencing market was the rapid-growing market in Asia-Pacific region.

    Europe's Metagenomic Sequencing market is expected to grow at the rapid CAGR from 2024 to 2032. This is due to the growing investment by the government and hospitals for improved healthcare facilities in this region. Further, the German Metagenomic Sequencing market held the largest market share, and the UK Metagenomic Sequencing market was the rapid-growing market in the European region.

    Key Players and Competitive Insights

    Leading market participants are investing hugely in research and development in order to expand their product lines, which will help the Metagenomic Sequencing market grow even more. Market players are also undertaking various strategic activities to spread their footprint, with important market developments inclusive of new product launches, mergers and acquisitions, higher investments, contractual agreements, and collaboration with other organizations. To spread and survive in a more competitive and rising market climate, the Metagenomic Sequencing industry must gives cost-effective items.

    Manufacturing locally in orde to minimize operational costs is one of the key business tactics utilized by manufacturers in the Metagenomic Sequencing industry to benefit clients and increase the growth of market sector. In recent years, the Metagenomic Sequencing industry has offered some of almost all significant advantages to medicine. Major players in the Metagenomic Sequencing market, including Pattern AG, Illumina Inc., Thermo Fisher Scientific Inc., Swift Bioscience Inc., BGI Genomics Co.

    Ltd., Oxford Nanopore Technologies Ltd, Eurofins Genomics, Pacific Biosciences of California Inc., BGI Genomics Co Ltd., Macrogen Inc., AstraZeneca, and others, are trying to increase market demand by investing in the research and development operations.

    Illumina Inc is an American biotechnology company founded in the year 1998, headquartered in San Diego, California, serving more than 140 countries. The company develops, produces, and sells integrated systems for the interpretation of genetic variation and biological function, providing a line of services and products that serves the genotyping, sequencing, gene expression, and proteomics markets. The company sells a variety of high-throughput DNA sequencing systems, depending on technology developed by Solexa.

    In April 2021, a partnership was announced by the company with Kartos Therapeutics, Inc. in order to co-develop a tumor protein (TP53) companion diagnostics (CDx) depending on the comprehensive genomic profiling content assay, TruSight Oncology of Illumina. This will expand the TruSight Oncology offerings into Illumine's hematologic malignancies. The company also announced an agreement with the Belgian Genetic Centers in order to evaluate whole-genome sequencing.

    Pattern AG, founded in the year 2018, is a private company that has been in the industry for five years. The company specializes in the Biotechnology and Biotechnology areas; the company is headquartered in Emeryville, California, USA. Pattern AG detects the most damaging pathogens and pests in the fields. The company uses this data in order to predict the biggest threats to field problems. It analyzes soil biology to predict main-field agronomic outcomes with 90% confidence before the start of the season.

    This precise and advanced timing unlocks the profitability of the farm by enabling accurate product placement for key agronomic inputs. In April 2023, the company announced that it had generated the largest single ecosystem database based on genomics. This project emphasizes creating a  soil microbiome map that will assist in agro-genomics research.

    Key Companies in the Metagenomic Sequencing Market market include

    Industry Developments

    December 2020 ARTIC Next Generation Sequencing (NGS) service was launched by Eurofins. This ARTIC SARS-CoV-2 Whole Genome Sequencing service consists of NGS and detailed reporting for universal end-to-end surveillance of pandemic development.

    February 2021 PacBio announced that Mercy Kansas City of Children increased its investment in highly accurate HiFi sequencing with four novels Sequel IIe Systems in order to add to its two existing Sequel IIe Systems.

    September 2021 AstraZeneca and Thermo Fisher Scientific, Inc. co-developed an NGS-based companion diagnostic. The collaboration was emphasized on commercializing NGS-based diagnostics in Russia.

    Future Outlook

    Metagenomic Sequencing Market Future Outlook

    The Metagenomic Sequencing Market is poised for robust growth at 15.00% CAGR from 2025 to 2035, driven by advancements in technology, increasing applications in healthcare, and rising demand for environmental monitoring.

    New opportunities lie in:

    • Develop targeted metagenomic solutions for personalized medicine applications.
    • Invest in AI-driven analytics to enhance data interpretation and insights.
    • Expand services to include metagenomic applications in agriculture and food safety.

    By 2035, the Metagenomic Sequencing Market is expected to achieve substantial growth, reflecting its critical role in diverse sectors.

    Market Segmentation

    Metagenomic Sequencing Regional Outlook

    North America
    • US
    • Canada
    Europe
    • Germany
    • France
    • UK
    • Italy
    • Spain
    • Rest of Europe
    Asia-Pacific
    • China
    • Japan
    • India
    • Australia
    • South Korea
    • Rest of Asia-Pacific
    Rest of the World
    • Middle East
    • Africa
    • Latin America

    Metagenomic Sequencing Technology Outlook

    • Shotgun Metagenomic Sequencing
    • 16s rRNA Sequencing
    • Whole Genome Sequencing and De Novo Assembly
    • Metatranscriptomic

    Metagenomic Sequencing Product & Service Outlook

    • Reagents and Consumables
    • Instruments
    • Services

    Report Scope

    Metagenomic Sequencing Report Scope

    Report Attribute/Metric Details
    Market Size 2024 USD 0.68 Billion
    Market Size 2035 3.16 (Value (USD Billion))
    Compound Annual Growth Rate (CAGR) 15.00% (2025 - 2035)
    Base Year 2024
    Market Forecast Period 2025 - 2035
    Historical Data 2018- 2022
    Market Forecast Units Value (USD Billion)
    Report Coverage Revenue Forecast, The Market Competitive Landscape, Growth Factors, and Trends
    Segments Covered Product & Service, Technology and Region
    Geographies Covered The North America, Europe, Asia Pacific, and the Rest of the World
    Countries Covered The US, German, Canada, France, the UK, Italy, Spain, Japan, India, China, Australia, South Korea, and Brazil
    Key Companies Profiled Pattern AG, Illumina Inc., Thermo Fisher Scientific Inc., Swift Bioscience Inc., BGI Genomics Co. Ltd., Oxford Nanopore Technologies Ltd, Eurofins Genomics, Pacific Biosciences of California Inc., BGI Genomics Co Ltd., Macrogen Inc., AstraZeneca 
    Key Market Opportunities Increase in research and development activities.
    Key Market Dynamics Increased development in the metagenomics sequencing technology.
    Market Size 2025 0.78 (Value (USD Billion))

    Market Highlights

    Author
    Kinjoll Dey
    Research Analyst Level I

    He is an extremely curious individual currently working in Healthcare and Medical Devices Domain. Kinjoll is comfortably versed in data centric research backed by healthcare educational background. He leverages extensive data mining and analytics tools such as Primary and Secondary Research, Statistical Analysis, Machine Learning, Data Modelling. His key role also involves Technical Sales Support, Client Interaction and Project management within the Healthcare team. Lastly, he showcases extensive affinity towards learning new skills and remain fascinated in implementing them.

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    FAQs

    What is the projected growth of the Metagenomic Sequencing market?

    The Metagenomic Sequencing market is the expected increase in total market value of 3.16 USD billion over a defined forecast period 2025–2035. It is driven by factors such as demand trends, technological advances, regulatory changes, and geographic expansion.

    What is the size of the Metagenomic Sequencing market?

    Metagenomic Sequencing market size was valued at approximately 0.68 billion USD in 2024. This figure will reach 3.16 billion USD covering all regions (America, Europe, Asia, MEA and ROW), focusing its segments / services / distribution channels till 2035.

    What is the CAGR of the Metagenomic Sequencing market?

    Metagenomic Sequencing market is expected to grow at a CAGR of 15% between 2025 and 2035.

    How much will the Metagenomic Sequencing market be worth by 2035?

    Metagenomic Sequencing market is expected to be worth of 3.16 billion USD, reflecting growth driven by usage, technology and global demands by the end of 2035.

    How will the Metagenomic Sequencing market perform over the next 10 years?

    Over the next 10 years the Metagenomic Sequencing market is expected to shift from usd billion 0.68 to 3.16 billion USD, led by adoption of advanced tech, demographic trends, regulatory approvals, with potential headwinds from 2025 to 2035.

    How much is the Metagenomic Sequencing market?

    The Metagenomic Sequencing market size valued at USD 0.58 Billion in 2024.

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